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Urartu Özgür Şafak Şeker

Urartu Özgür Şafak Şeker
Urartu Özgür Şafak Şeker
Associate Professor
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RESEARCH AREA
Synthetic Biology, Genetic Engineering, Genome Engineering

CONTACT INFORMATION

+90 (312) 210 5167
Office 137

PROFESSIONAL EXPERIENCE

Associate Professor

2026 - (Present)

Department of Biological Sciences, Middle East Technical University, Ankara, Turkey

Associate Professor / Assistant Professor (PI)

2014 - 2026

Institute of Materials Science and Nanotechnology (UNAM), Life Sciences Section, Bilkent University, Ankara, Turkey

Research Associate

2011 - 2014

Department of Biological Engineering, Synthetic Biology Research Center, Massachusetts Institute of Technology (MIT), Cambridge, MA, USA

Postdoctoral Research Fellow

2010 - 2011

School of Electrical and Electronics Engineering and School of Physical and Mathematical Sciences, Nanyang Technological University (NTU), Singapore

EDUCATION

Ph.D.

2009

Molecular Biology-Genetics and Biotechnology Program, Istanbul Technical University, Istanbul, Turkey

Visiting Graduate Student: University of Washington, Genetically Engineered Materials Science and Engineering Center, Seattle, WA, USA (2004–2007)

M.Sc.

2003

Molecular Biology-Genetics and Biotechnology Program, Istanbul Technical University, Istanbul, Turkey

B.Sc.

2001

Department of Food Engineering, Faculty of Engineering, Hacettepe University, Ankara, Turkey

RESEARCH SUMMARY

Our research focuses on engineering biological systems to develop next-generation technologies for therapeutics, diagnostics, and biomanufacturing. We combine synthetic biology, molecular and cellular engineering, protein engineering, and AI-assisted biomolecular design to create programmable biological systems with tailored functions. A major research direction is the development of engineered microbial and mammalian cells for therapeutic applications, including living therapeutics, recombinant and bispecific antibodies, mRNA therapeutics, and advanced protein production platforms. We engineer genetic circuits, secretion systems, biosensors, and genome-editing technologies to enable precise sensing, control, and delivery of biological functions. Our research also develops scalable expression and host-cell engineering platforms across bacterial, yeast, and mammalian systems, supported by combinatorial genetic-part libraries and high-throughput screening. By integrating computational design with experimental synthetic biology, we aim to establish versatile biofactory platforms that accelerate the translation of engineered biological systems from fundamental research toward biotechnology, biopharmaceutical, diagnostic, and precision-medicine applications.

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